Research Publications

Page Updated On :29-02-2020
  1. Publications 2018-19


    1. Ali S, Mir ZA, Bhat JA, Tyagi A, Chandrashekar N, Yadav P, Rawat S, Sultana M & Grover A. 2018. Isolation and characterization of systemic acquired resistance marker gene PR1 and its promoter from Brassica juncea3 Biotech 8: 10.


    1. Awana M, Yadav K, Rani K, Gaikwad K, Praveen S, Kumar S & Singh A. 2019. Insights into salt stress-induced biochemical, molecular and epigenetic regulation of spatial responses in pigeonpea (Cajanus cajan L.). J Plant Growth Regulation (https://


    1. Banerjee S, Gill S, Gawade B, Jain PK, Subramaniam K & Sirohi A. 2018. Host delivered RNAi of two cuticle collagen genes, Mi-col-1 and Lemmi-5, hampers structure and fecundity in Meloidogyne incognita. Front Plant Sci 8: 2266.


    1. Bharti S & Sinha SK. 2018. Biochemical characterization of building block of condensed tannin in faba bean (Vicia faba L.). Vegetos 31: 25-27.


    1. Bhradwaj N, Gogoi N, Barthakur S & Basumatary N. 2018. Morpho-physiological responses in different mungbean genotypes under drought stress. Res J Recent Sci 7:10-18.


    1. Chandrashekar N, Ali S & Grover A. 2018. Exploring expression patterns of PR-1, PR-2, PR-3, and PR-12 like genes in Arabidopsis thaliana upon Alternaria brassicae inoculation. 3 Biotech 8: 230.


    1. Chowrasia S, Panda AK, Rawal HC, Kaur H & Mondal TK. 2018. Identification of jumonjiC domain containing gene family among the Oryza species and their expression analysis in FL478, a salt tolerant rice genotype. Plant Physiol Biochem 130: 43-53.


    1. Dalal M, Sahu S, Tiwari S, Rao AR & Gaikwad K. 2018. Transcriptome analysis reveals interplay between hormones, ROS metabolism and cell wall biosynthesis for drought-induced root growth in wheat. Plant Physiol Biochem 130: 482-492.
    2. Dash PK, Gupta P, Jailani AK & Rai R. 2018. Hydropenia induces expression of drought responsive genes (DRGs) erd1, hat, plD, and zfa in Linum usitatissimum L. Ind J Exp Biol 56: 743-749


    1. Dash PK, Rai R, Rai V & Pasupalak S. 2018. Drought induced signaling in rice: delineating canonical and non-canonical pathways. Front Chem 6: 264.


    1. Divte P, Yadav P, Jain PK, Paul S & Singh B. 2019. Ethylene regulation of root growth and phytosiderophore biosynthesis determines iron defiiciency tolerance in wheat (Triticum spp). Environ Exp Bot 162: 1-13.


    1. Dubey H, Kiran K, Jaswal R, Jain P, Kayastha AM, Bhardwaj SC, Mondal TK & Sharma TR. 2019. Discovery and profiling of small RNAs from Puccinia triticina by deep sequencing and identification of their potential targets in wheat. Funct Integr Genomics 7: 1-7.


    1. Ganie SA, Molla KA, Henry RJ, Bhat KV & Mondal TK. 2019. Advances in understanding salt tolerance in rice. Theor Appl Genet 132: 851-70.
    2. Gaurav AK, Namita DR, Raju DV, Singh M, Singh B, Krishnan SG, Mithra SV, Panwar S, Singh M & Dhiman MR. 2018. Genetic characterization of Rosa species using morphological markers. Indian J Agr Sci 88: 1396-402.


    1. Gayatri, Rani M, Mahato AK, Sinha SK, Dalal M, Singh NK & Mandal PK. 2018. Homeologue specific gene expression analysis of two vital carbon metabolizing enzymes, citrate synthase and NADP-isocitrate dehydrogenase, from wheat (Triticum aestivum L.) under nitrogen stress. Appl Biochem Biotech (


    1. Gogoi N, Farooq M, Barthakur S, Baroowa B, Paul S, Bharadwaj N & Ramanjulu S. 2018. Thermal stress impacts on reproductive development and grain yield in grain legumes. J Plant Biol 61: 265-291.


    1. Gupta NC, Gupta RK, Rao M & Kumar A. 2019. Combining the sclerotinia stem rot disease resistance trait in interspecific hybrids of Brassica napus and Brassica carinata. Ann Pl Protec Sci 27: 70-76.


    1. Gupta OP, Dahuja A, Sachdev A, Jain PK, Kumari S & Praveen S. 2019. Cytosine methylation of isoflavone synthase gene in the genic region positively regulates its expression and isoflavone biosynthesis in soybean seeds. DNA Cell Biol (doi: 10.1089/dna.2018.4584).


    1. Gupta OP, Dahuja A, Sachdev A, Kumari S, Jain PK, Vinutha T & Praveen S. 2019. Conserved miRNAs modulate the expression of potential transcription factors of isoflavonoid biosynthetic pathway in soybean seeds. Mol Biol Rep (https://


    1. Kaur A, Vishwakarma H, Maibam A & Padaria JC. 2018. Cloning, characterization and in-silico studies on abiotic stress responsive Hsp17.9 gene from Prosopis cinerariaIndian J Plant Physiol (


    1. Kohli D, Chidambaranathan P, Tej Kumar JP, Singh AK, Kumar A, Subramaniam K, Srinivasan R, Bharadvaja N & Jain PK. 2018. Host-mediated RNAi of a Notch-like receptor gene in Meloidogyne incognita induces nematode resistance. Parasitology ( 10.1017/ S0031182018000641).


    1. Kumar S, Dhar S, Barthakur S, Chandrakala M, Kochewad S A, Meena LR & Kumar D. 2018. Effect of integrated potassium management on soil biological properties and yields of corn under corn-wheat cropping system. Int J Curr Microbiol App Sci 7: 1855-1866.


    1. Kumar S, Dhar S, Barthakur S, Kumar S, Mondal B, Kumar D, Kochewad SA & Ram L. 2018. Integrated K management exhibit a key role in potassium uptake transporter (ZmKUP) expression to improve growth and yield of corn. Int J Curr Microbiol App Sci 7: 1867-1887.


    1. Kumari S, Kumar J, Kumar RR, Kumar A, Nimmy MS, Ranjan T & Kumar V. 2019. Genetic diversity analysis in grasspea (Lathyrus sativus L.) using SSR molecular markers. Curr J Appl Sci Technol 33: 1-6.


    1. Latha GM, Raman KV, Lima GM, Pattanayak D, Singh AK, Chinnusamy V, Bansal KC, Rao KRSS & Mohapatra T. 2019. Genetic engineering of indica rice with AtDREB1A gene for enhanced abiotic stress tolerance. Plant Cell Tissue Org Cult 136: 173-188.


    1. Mehraj U, Panwar S, Singh KP, Pandey R, Solanke AU & Mallick N. 2018. Development of protocol for in vitro rooting and hardening of doubled haploid line of Tagetes erecta L. derived through ovule culture. Indian J Hort 75: 651-656.


    1. Mishra P, Jain A, Takabe T, Tanaka Y, Negi M, Singh N, Jain N, Mishra V, Maniraj R & Sreevathsa R. 2019. Heterologous expression of serine hydroxymethyltransferase3 from rice confers tolerance to salinity stress in E. coli and Arabidopsis. Front Plant Sci 10: 217.


    1. Mishra P, Singh N, Jain A, Jain N & Mishra V. 2018. Identification of cis-regulatory elements associated with salinity and drought stress tolerance in rice from co-expressed gene interaction networks. Bioinformation 14: 123.


    1. Mittal S, Banduni P, Mallikarjuna MG, Rao AR, Rao AR, Jain PA, Dash PK & Thirunavukkarasu 2018. Structural, functional and evolutionary characterization of major drought transcription factors families in maize. Front Chem 6:177.
    2. Mondal TK, Rawal HC, Chowrasia S, Varshney D, Panda AK, Mazumdar A, Kaur H, Gaikwad K, Sharma TR & Singh NK. 2018. Draft genome sequence of first monocot-halophytic species Oryza coarctata reveals stress-specific genes. Sci Rep 8: 13698.
    1. Nagar CK, Gayatri, Bharati A, Sinha SK, Venkatesh K & Mandal PK. 2018. Nitrogen stress leads to induce change in expression of genes for nitrate transporter in wheat genotypes. Intl J Curr Microbiol Appl Sci 7: 06.


    1. Nagar CK, Gayatri, Bharati A, Sinha SK, Venkatesh & Mandal PK.2018. Nitrogen stress induced changes in root system architecture (RSA) in diverse wheat (T. aestivumL.) genotypes at seedling stage. Wheat Barley Res 10: 93-101.


    1. Ngangkham U, Nath M, Dokku P, Mithra SA, Ramamurthy S, Singh NK, Sharma RP & Mohapatra T. 2018. An EMS-induced new sequence variant, TEMS5032, in the coding region of SRS3 gene leads to shorter grain length in rice (Oryza sativa L.). J App Genet 59: 377-389.


    1. Padaria JC, Tarafdar A, Sharma V, Vishwakarma H, Singh GP & Singh S. 2019. Cultivar specific response of callus induction and plant regeneration from mature embryos in different elite Indian wheat. Res J Biotech 14: 1-8.


    1. Panwar BS, Kaur J, Kumar P & Kaur S. 2018. A novel cry52Ca1 gene from an Indian Bacillus thuringiensis isolate is toxic to Helicoverpa armigera (cotton boll worm). J Invert Pathol 159:137-140.


    1. Panwar BS, Narula RK & Kaur S. 2018. Theoretical 3D modelling of a novel Cry toxin isolated from native Bacillus thuringiensis isolate SK711. Indian J Entomol 80: 108-113.


    1. Panwar BS, Ram C, Narula RK & Kaur S. 2018. Pool deconvolution approach for high-throughput gene mining from Bacillus thuringiensisAppl Microbiol Biotechnol 102: 1467-1482.


    1. Rai S, Kaushik M, Sinha SK, Gupta RK, Mahendru A & Mandal PK. 2018. Transcriptome data of cultivated tetraploid and hexaploid wheat variety during grain development. Data in Brief 22:551-556.


    1. Ram H, Dhar S, Choudhary H, Sharma RK, Prasad L, Solanke AU & Tomar BS. 2018. Estimates of genetic components of variation for earliness and yield traits in garden pea (Pisum sativum L.). Chem Sci Rev Lett 7: 379-382.


    1. Ram H, Dhar S, Choudhary H, Sharma RK, Solanke AU, Prasad & Tomar BS. 2018. Combining ability analysis for earliness and yield related characters in pea (Pisum sativum). Indian J Agr Sci 88: 69-73.


    1. Ramakrishna G, Kaur P, Nigam D, Chaduvula PK, Yadav S, Talukdar A, Singh NK & Gaikwad K. 2018. Genome-wide identification and characterization of InDels and SNPs in Glycine max and Glycine soja for contrasting seed permeability traits. BMC Plant Biol 18: 141.


    1. Raman KV, Agarwal D, Rao SR, Sreevathsa R, Singh AK, Abdin MZ, Mohapatra T & Pattanayak D. 2018. Rapid and efficient Agrobacterium-mediated transformation of early scutellum derived calli of indica rice. Indian J Exp Biol 56: 20-28.


    1. Rathinam M, Kesiraju K, Singh S, Thimmegowda V, Rai V, Pattanayak D & Sreevathsa R. 2019. Molecular interaction-based exploration of the broad spectrum efficacy of a Bacillus thuringiensis insecticidal chimeric protein, Cry1AcF. Toxins 11: 143.


    1. Rawal HC, Mithra SA, Arora K, Kumar V, Goel N, Mishra DC, Chaturvedi KK, Rai A, Devi SV, Sharma TR & Solanke AU. 2018. Genome-wide analysis in wild and cultivated Oryza species reveals abundance of NBS genes in progenitors of cultivated rice. Plant Mol Biol Rep 36: 373-386.


    1. Reddy SH, Kambalimath SK, Singhal RK, Chikkakariyappa MK, Muthurajan R, Rajanna MP, Sreevathsa R, Sevanthi AM, Mohapatra T, Sarla N & Chinnusamy V. 2018. Allele‐specific analysis of single parent backcross population identifies HOX10 transcription factor as a candidate gene regulating rice root growth. Physiol Plant.


    1. Sahu S, Rao AR, Pandey J, Gaikwad K, Ghoshal S & Mohapatra T. 2018. Genome-wide identification and characterization of lncRNAs and miRNAs in cluster bean (Cyamopsis tetragonoloba). Gene 667: 112-121


    1. Saini RP, Raman V, Dhandapani G, Malhotra EV, Sreevathsa R, Kumar PA, Sharma TR & Pattanayak D. 2018. Silencing of HaAce1 gene by host-delivered artificial microRNA disrupts growth and development of Helicoverpa armigeraPLoS ONE 13: e0194150.


    1. Sanand S, Kumar S, Bara N & Kaul G. 2018. Comparative evaluation of half-maximum inhibitory concentration and cytotoxicity of silver nanoparticles and multiwalled carbon nanotubes using buffalo bull spermatozoa as a cell model. Toxicol Indus Health (DOI: 10.1177/0748233718783389).


    1. Saxena S, Kaila T, Chaduvula PK, Singh A, Singh NK & Gaikwad K. 2019. Novel chloroplast microsatellite markers in pigeonpea (Cajanus cajan L. Millsp.) and their transferability to wild Cajanus species. AJCS 13: 185-191.


    1. Sevanthi AM, Kandwal P, Kale PB, Prakash C, RamkumarMK,YadavN,MahatoAK,Sureshkumar V, Behera M, Deshmukh RK & Jeyaparakash P. 2018. Whole genome characterization of a few EMS-induced mutants of upland rice variety Nagina 22 reveals a staggeringly high frequency of SNPs which show high phenotypic plasticity towards the wild-type. Front Plant Sci 9.


    1. Sharma P, Rao M & Gupta NC. 2018. Molecular aspects of sclerotinia stem rot disease management in oilseed crops. Int J Microbiol Res 4: 1166-1170.


    1. Sharma P, Samkumar A, Rao M, Mishra DC, Singh VV, Prasad L & Gupta NC. 2018. Genetic diversity studies based on morphological variability, pathogenicity and molecular phylogeny of the S. sclerotiorum population from Indian mustard (Brassica juncea). Front Microbiol 9:1169.


    1. Sharma P, Watts A, Kumar V, Srinivasan R & Siwach P. 2018. Cloning, characterization and expression analysis of APETALA2 genes of Brassica juncea (L.) Czern. Ind J Exp Biol 56: 604-610.


    1. Sharma S, Kaur R, Solanke AK, Dubey H, Tiwari S & Kumar K. 2019. Transcriptome sequencing of Himalayan raspberry (Rubus ellipticus) and development of simple sequence repeat markers. 3 Biotech 9: 161.


    1. Shingote PR, Mithra SA, Sharma P, Devanna NB, Arora K, Holkar SK, Khan S, Singh J, Kumar S, Sharma TR & Solanke AU. 2019. LTR retrotransposons and highly informative ISSRs in combination are potential markers for genetic fidelity testing of tissue culture-raised plants in sugarcane. Mol Breed 39: 25.


    1. Singh B, Singh N, Mishra S, Tripathi K, Singh BP, Rai V, Singh AK & Singh NK. 2018. Morphological and molecular data reveal three distinct populations of Indian wild rice Oryza rufipogon Griff. species complex. Front Plant Sci 9: 123.


    1. Singh S, Khan S, Padaria JC & Solanke AU. 2018. Evaluation of finger millet as heat tolerant crop using physiological and biochemical assays. J AgriSearch 5:110-115.


    1. Singh S, Kumar NR, Maniraj R, Lakshmikanth R, Rao KYS, Muralimohan N, Arulprakash T, Karthik K, Shashibhushan NB, Vinutha T, Pattanayak D, Dash PK, Kumar PA & Sreevathsa R. 2018. Expression of Cry2Aa, a Bacillus thuringiensis insecticidal protein in transgenic pigeonpea confers resistance to gram pod borer, Helicoverpa armigera. Sci Rep 8: 8820.


    1. Sinha S, Sevanthi V, Chaudhary S, Tyagi P, Venkadesan S, Rani M & Mandal P. 2018. Transcriptome analysis of two rice varieties contrasting for nitrogen use efficiency under chronic N starvation reveals differences in chloroplast and starch metabolism-related genes. Genes 9: 206.


    1. Sinha SK & Kumar A. 2018. Condensed tannin: a major anti-nutritional constituent of faba bean (Vicia faba L). Hort Int J 2:32-33.


    1. Sinha SK, Rani M, Kumar A, Kumar S, Venkatesh K & Mandal PK. 2018. Natural variation in root system architecture in diverse wheat genotypes grown under different nitrate conditions and root growth media. Theor Exp Plant Physiol 30: 223-234.


    1. Sinha SK, Tyagi A & Mandal PK. 2018. External nitrogen and carbon source-mediated response on modulation of root system architecture and nitrate uptake in wheat seedlings. J Plant Growth Regulation (


    1. Sreeman S, Vijayaraghavareddy P, Sreevathsa R, Rajareddy S, Arakesh S, Bharti P, & Soolanayakanahally R. 2018. Introgression of physiological traits for a comprehensive improvement of drought adaptation in crop plants. Front Chem 6: 92.


    1. Sureshkumar V, Dutta B, Kumar V, Prakash G, Mishra DC, Chaturvedi KK, Rai A, Sevanthi AM & Solanke AU. 2019. RiceMetaSysB: a database of blast and bacterial blight responsive genes in rice and its utilization in identifying key blast-resistant WRKY genes. Database.


    1. Taloh A, Dantuluri DS, Kumar G, Padaria JC, Kumar S & Rao GP. 2018. Elimination of ‘Candidatus Phytoplasma aurantifolia’ from Chrysamthemum morifolium cv. Ajay Orange by application of oxytetracycline by in vivo and in vitro treatments. Phytopath Mollicutes 8: 1-7.


    1. The International Wheat Genome Sequencing Consortium (IWGSC). 2018. Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science 361: (6403): eaar7191.


    1. Tribhuvan KU, Kumar K, Sevanthi AM & Gaikwad K. 2018. MutMap: a versatile tool for identification of mutant loci and mapping of genes. Indian J Plant Physiol 23: 612-621.


    1. Tribhuvan KU, Mithra SVA, Sharma P, Das A, Kumar K, Tyagi A, Solanke AU, Sandhya, Sharma R, Jadhav PV, Raveendran M, Fakrudine B, Sharma TR, Singh NK & Gaikwad K. 2019. Identification of genomic SSRs in cluster bean (Cyamopsis tetragonoloba) and demonstration of their utility in genetic diversity analysis. Indus Crops Products 133: 221-231.


    1. Tripathy K, Singh B, Singh N, Rai V, Misra G & Singh NK. 2018. A database of wild rice germplasm of Oryza rufipogon species complex from different agro-climatic zones of India. Database.


    1. Tyagi A, Sandhya, Sharma P, Saxena S, Sharma R, Mithra SVA, Solanke AU, Singh NK, Sharma TR & and Gaikwad K. 2019. Genome size of clusterbean (Cyamposis tetragonaloba) is significantly smaller compared to its wild relatives as estimated by flow cytometry. Gene 18: 30254-9.


    1. Varshney D, Rawal HC, Dubey H, Bandyopadhyay T, Bera B, Mohan Kumar P, Singh NK & Mondal TK. 2019. Tissue specific long non-coding RNA landscape and their association with aroma formation of tea. Ind Crops Prod 133: 79-89.


    1. Vishwakarma H, Junaid A, Manjhi J, Singh GP, Gaikwad K & Padaria JC. 2018. Heat stress transcripts, differential expression, and profiling of heat stress tolerant gene TaHsp90 in Indian wheat (Triticum aestivum L.) cv C306. PLoS ONE 13: e0198293.


    1. Yadav R, Prasad L, Nanjundan J, Tewari AK, Singh P, Sandhu PS, Pant Usha, Avtar R, Radhamani J, Kumar S, Rao M & Rana JC. 2018. Identification and evaluation of Indian mustard genotypes for white rust resistance andagronomic performance.Indian J Genet 78: 81-89.


    1. Yadav SA, Jadhav MP, Adiger S, Singh S, Solanke AU, Katageri IS & Vamadevaiah HM. 2018. Expression studies of transcription factors under moisture stress in Cotton (Gossypium hirsutum L.). Indian J Genet Plant Breed 78: 393-397.


    1. Yugandhar P, Sun Y, Liu L, Negi M, Nallamothu V, Sun S, Neelamraju S, Rai V & Jain A. 2018. Characterization of the loss-of-function mutant NH101 for yield under phosphate deficiency from EMS-induced mutants of rice variety Nagina22.Plant Physiol Biochem 130: 1-3.


    1. Zargar SM, Rai V & Rakwal R. 2018. Towards establishment of comprehensive reference proteome maps of legume crops.



Updated date: 29/02/2020 - 12:43